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査読付き論文


  1. Fujita H., Yoshida S., Suzuki K., Toju H.., (2025).
    Alternative stable states of microbiome structure and soil ecosystem functions. Environmental Microbiome.
    DOI: 10.1186/s40793-025-00688-4
  2. Fujita H., Yoshida S., Suzuki K., Toju H.., (2024).
    Soil prokaryotic and fungal biome structures associated with crop disease status across the Japan Archipelago. mSphere.
    DOI: 10.1128/msphere.00803-23
  3. Hayashi I., Fujita H., Toju H.., (2024).
    Deterministic and stochastic processes generating alternative states of microbiomes. ISME Communications.
    DOI: 10.1093/ismeco/ycae007
  4. Fujita H., Ushio M., Suzuki K., Abe S. M., Yamamichi M., Okazaki Y., Canarini A., Hayashi I., Fukushima K., Fukuda S., Kiers E. T., Toju H.., (2023).
    Metagenomic analysis of ecological niche overlap and community collapse in microbiome dynamics. Frontiers in Microbiology.
    DOI: 10.3389/fmicb.2023.1261137
  5. Fujita H., Ushio M., Suzuki K., Abe S. M., Yamamichi M., Okazaki Y., Canarini A., Hayashi I., Fukushima K., Fukuda S., Kiers E. T., Toju H.., (2023).
    Facilitative interaction networks in experimental microbial community dynamics. Frontiers in Microbiology.
    DOI: 10.3389/fmicb.2023.1153952
  6. Yajima D., Fujita H., Hayashi I., Shima G., Suzuki K., Toju H.., (2023).
    Core species and interactions prominent in fish-associated microbiome dynamics. Microbiome.
    DOI: 10.1186/s40168-023-01498-x
  7. Fujita H., Ushio M., Suzuki K., Abe S. M., Yamamichi M., Iwayama K., Canarini A., Hayashi I., Fukushima K., Fukuda S., Kiers E. T., Toju H.., (2023).
    Alternative stable states, nonlinear behavior, and predictability of microbiome dynamics. Microbiome.
    DOI: 10.1186/s40168-023-01474-5
  8. Hori Y., Fujita H., Hiruma K., Narisawa K., Toju H.., (2021).
    Synergistic and Offset Effects of Fungal Species Combinations on Plant Performance. Frontiers in Microbiology.
    DOI: 10.3389/fmicb.2021.713180
  9. Toju H., Abe M., Ishii C., Hori Y., Fujita H., Fukuda S.., (2020/06/25).
    Scoring Species for Synthetic Community Design: Network Analyses of Functional Core Microbiomes. Frontiers in Microbiology.
    DOI: 10.3389/fmicb.2020.01361

プレスリリース


  1. 微生物生態系の崩壊は予測できる―医療・工業・農業における微生物叢制御の基盤情報学―.
  2. https://www.kyoto-u.ac.jp/ja/research-news/2023-03-30-2
  3. 日本農地における安定な土壌微生物群集を推定―細菌・真菌群集の安定状態とその機能―.
  4. https://www.kyoto-u.ac.jp/ja/research-news/2025-03-13-0